Table 4: Asthma Signature Genes-overlap between OVA and Asp*

          Systematic**        Genbank                 Description***

1        101616_at            M19911                  immunoglobulin kappa chain

2        93717_at              NM_011331           SCYA12 (MCP-5)

3        101436_at            NM_008599           SCYB9 (Mig)

4        101027_s_at         NM_013917           pituitary tumor-transforming 1

5        101803_at            AJ010792               Muc5AC-like gene

6        93755_at              NM_023881           resistin like beta

7        94330_at              AK002734              EST

8        99578_at              NM_011623           topoisomerase (DNA) II alpha

9        103289_at            NM_016869           low density lipoprotein receptor-related protein 4

10      103088_at            NM_007697           close homolog of L1

11      102782_at            BC006884              EST

12      162287_r_at         NM_017474           chloride channel calcium activated 3

13      94761_at              X70058                   EST

14      93097_at              NM_007482           arginase 1

15      101870_at            V00793                   immunogloblin heavy chain (IgG1)

16      92459_at              NM_021443           SCYA8 (MCP-2)

17      161968_f_at         D83648                   CCR5

18      93099_f_at           NM_011121           polo-like kinase homolog

19      92742_at              U77462                   SCYA11 (eotaxin-1)

20      102337_s_at         M31312                  beta Fc receptor type II

21      100127_at            BC018397              cellular retinoic acid binding protein II

22      102736_at            M19681                  CCL2 (JE)

23      102204_at            L36434                   Kreisler

24      101075_f_at         NM_011783           anterior gradient 2

25      160159_at            NM_007629           cyclin B1, related sequence 1

26      101024_i_at         AJ005559               SPRR2A

27      95338_s_at           NM_008605           matrix metalloproteinase 12

28      103024_at            NM_007403           a disintegrin and metalloprotease domain 8

29      101752_f_at         BC003888              immunoglobulin heavy chain

30      96973_f_at           X02468                   immunoglobulin kappa chain

31      97563_f_at           AF042798              VAV

32      94383_at              NM_009364           tissue factor pathway inhibitor 2

33      96336_at              NM_025961           glycine amidinotransferase

34      96081_at              X60980                   EST

35      101747_f_at         BC010324              EST

36      102719_f_at         D83648                   CCR5

37      95339_r_at           NM_008605           matrix metalloproteinase 12

38      101464_at            NM_011593           tissue inhibitor of metalloproteinase

39      97574_f_at           AF036736              Tyk2

40      99701_f_at           AJ005560               pheromone receptor V2R1

41      99412_at              U29677                   CCR3

42      102718_at            AF022990              CCR5

43      101320_f_at         L28059                   Ig B cell antigen receptor gene

44      101025_f_at         AJ005559               SPRR2A

45      103507_at            X93328                   EGF-like module containing, mucin-like, hormone receptor-like sequence 1

46      104388_at            NM_011338           SCYA9 (MRP-2)

47      101871_f_at         BC003435              immunoglobulin heavy chain (IgG1)

48      102860_at            BC002065              serine protease inhibitor 2-1

49      97575_f_at           AF036737              immunoglobulin heavy chain

50      98372_at              AF253409              aldehyde dehydrogenase family 1, subfamily A3

51      93302_at              U78770                   trefoil protein; spasmolytic polypeptide (mSP) gene

52      102155_f_at         K03461                   immunoglobulin kappa chain

53      103362_at            NM_008965           prostaglandin E receptor 4 (subtype EP4)

54      104374_at            NM_009252           serine protease inhibitor 2-2

55      103715_at            NM_009132           scinderin

56      97008_f_at           L33943                   sperm motility kinase 2

57      92737_at              U20949                   lymphoid-specific interferon regulatory factor (LSIRF)

58      93858_at              NM_021274           SCYB10 (IP-10)

59      100362_f_at         X02463                   immunoglobulin heavy chain

60      98765_f_at           U23095                   Mus musculus CAG trinucleotide repeat mRNA

61      97567_f_at           AF045026              immunoglobulin kappa chain

62      96020_at              NM_009777           complement component 1, q subcomponent, beta polypeptide

63      93871_at              L32838                   interleukin 1 receptor antagonist

64      99457_at              X82786                   antigen identified by monoclonal antibody Ki 67

65      92898_at              NM_007825           cytochrome P450, 7b1

66      99413_at              NM_009912           CCR1

67      93441_at              BC002320              EST

68      161898_i_at         NM_013604           metaxin

69      99384_at              M13945                  2'-5¢ oligoadenylate synthetase

70      100299_f_at         U68543                   immunoglobulin kappa chain

71      100360_f_at         X02466                   immunoglobulin heavy chain

72      103821_at            NM_011799           cell division cycle 6 homolog

73      104712_at            L00039                   c-myc

74      94792_at              AV230061              EST

75      97577_f_at           AF042086              immunoglobulin heavy chain

76      95749_at              AK014338              arginine-rich, mutated in early stage tumors

77      100376_f_at         AF025445              immunoglobulin heavy chain

78      99564_at              NM_010931           nuclear protein 95

79      96972_f_at           X00651                   immunoglobulin kappa chain

80      97826_at              BF578028               EST

81      101920_at            AF036898              DNA polymerase epsilon, subunit 2

82      102076_at            AJ235940               immunoglobulin kappa gene

83      92694_at              NM_009892           chitinase 3-like 3

84      98500_at              D13695                   interleukin 1 receptor-like 1

85      160509_at            NM_023186           chitinase, acidic

86      101716_at            AF017260              ribonuclease 5 precursor

87      94425_at              NM_010745           lymphocyte antigen 86

88      100721_f_at         NM_019633           immunoglobulin heavy chain

89      161000_i_at         BC009096              EST

90      97576_f_at           AF036738              immunoglobulin heavy chain

91      103492_at            NM_019696           metallocarboxypeptidase CPX-1

92      92471_i_at           NM_011408           schlafen 2

93      102157_f_at         M15520                  immunoglobulin kappa chain

94      104423_at            AK012919              EST

95      97566_f_at           AF045024              cell cycle regulatory transcription factor DP1

96      99850_at              X01857                   EST

97      99799_at              NM_011691           vav oncogene

98      103977_at            NM_007972           coagulation factor X

99      100682_f_at         BC018315              immunoglobulin heavy chain (IgM)

100    102712_at            X03505                   serum amyloid A (SAA) 3

101    95546_g_at           NM_010512           insulin-like growth factor 1

102    102334_at            NM_010071           downstream of tyrosine kinase 2

103    161476_at            NM_011179           prosaposin

104    94747_at              NM_007780           colony stimulating factor 2 receptor, beta 1, low-affinity (granulocyte-macrophage)

105    160973_at            AV113368              EST

106    94774_at              NM_008327           interferon activated gene 202A

107    97519_at              NM_009263           secreted phosphoprotein 1

108    92406_at              D31956                   CD7 antigen

109    97527_at              NM_025415           EST

110    104509_at            NM_009890           cholesterol 25-hydroxylase

111    92736_at              NM_007514           solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

112    94357_at              NM_019810           solute carrier family 5, member 1

113    103563_at            AK015966              EST

114    100325_at            NM_008147           glycoprotein 49 A

115    101718_f_at         U68543                   immunoglobulin kappa chain

116    92223_at              NM_007574           complement component 1, q subcomponent, c polypeptide

117    92877_at              NM_009369           transforming growth factor, beta induced, 68 kDa

118    162362_f_at         NM_011607           tenascin C

119    92217_s_at           U05265                   BALB/c gp49B

120    104174_at            NM_008813           ectonucleotide pyrophosphatase/phosphodiesterase 1

121    99057_at              M12379                  EST

122    161173_f_at         AV229143              EST

123    103226_at            NM_008625           mannose receptor, C type 1

124    95753_at              BG175174              EST

125    97763_at              L11455                   neutrophil cytosolic factor 1

126    99541_at              AJ223293               kinesin-like 1

127    96971_f_at           X00652                   immunoglobulin heavy chain

128    104308_at            NM_021334           integrin alpha X

129    92639_at              BC014711              serine/threonine kinase 6

130    102585_f_at         AB017349              immunoglobulin light chain

131    96964_at              L14554                   immunoglobulin light chain

132    102354_at            BC004617              EST

133    101640_f_at         U68543                   immunoglobulin kappa chain

134    101331_f_at         U68543                   immunoglobulin kappa chain

135    92762_at              NM_011999           C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 6

136    99979_at              NM_009994           cytochrome P450, 1b1, benz[a]anthracene inducible

137    102755_at            NM_010584           intelectin

138    99876_at              AJ131777               src-like adaptor protein

139    100771_at            Y17159                   lymphocyte antigen 57

140    102025_at            NM_018866           SCYB13 (BLC/BCA-1)

141    101521_at            BC004702              baculoviral IAP repeat-containing 5

142    98562_at              NM_007572           complement component 1, q subcomponent, alpha polypeptide

143    100116_at            NM_026515           EST

144    103210_at            NM_007781           colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)

145    97444_at              NM_023065           interferon gamma inducible protein 30

146    103040_at            NM_009856           CD83 antigen

147    92832_at              NM_009896           cytokine inducible SH2-containing protein 1

148    101468_at            X12905                   properdin factor, complement

149    101656_f_at         U68543                   immunoglobulin kappa chain

150    160406_at            AJ006033               ctsk

151    161511_f_at         AK019325              EST

152    100479_at            NM_007872           DNA methyltransferase 3A

153    96784_at              BE573736               EST

154    98473_at              NM_009705           arginase type II

155    103690_at            AW125574             EST

156    97411_at              NM_007900           ect2 oncogene

157    102990_at            AK019448              procollagen, type III, alpha 1

158    101913_at            NM_010423           hairy/enhancer-of-split related with YRPW motif 1

159    96511_s_at           NM_011691           vav oncogene

160    96515_at              U70430                   estrogen receptor beta

161    99509_s_at           NM_010589           Janus kinase 3

162    102658_at            NM_010555           interleukin 1 receptor, type II

163    99405_at              Z95479                   immunoglobulin kappa chain

164    102001_at            NM_009104           ribonucleotide reductase M2

165    100772_g_at         Y17159                   lymphocyte antigen 57

166    100156_at            NM_008566           mini chromosome maintenance deficient 5

167    102884_at            NM_010566           inositol polyphosphate-5-phosphatase, 145 kDa

168    98772_at              NM_009141           SCYB5 (LIX)

169    98859_at              M99054                  glucose dependent insulinotropic polypeptide

170    93465_at              AK020278              EST

171    102697_at            NM_019640           phosphotidylinositol transfer protein, beta

172    104548_at            NM_009434           tumor-suppressing subchromosomal transferable fragment 3

173    160446_at            U46068                   von Ebner minor salivary gland protein mRNA

174    92918_at              U66079                   coagulation factor VII

175    99926_at              AB001489              EST

176    98034_at              NM_010387           histocompatibility 2, class II, locus Mb1

177    103441_at            NM_007788           casein kinase II, alpha 1 related sequence 4

178    101868_i_at         NM_010388           histocompatibility 2, class II, locus Mb2

179    104065_at            AB042828              EDEM, similar to alpha-mannosidase

180    103418_at            BC003335              EST

181    103201_at            NM_009445           Ttk protein kinase

182    102892_at            U31908                   potassium voltage-gated channel, shaker-related subfamily, beta member 2

183    101020_at            NM_009982           cathepsin C

184    102372_at            BC006026              immunoglobulin joining chain

185    96295_at              BC004827              DNA segment, Chr 8, ERATO Doi 814, expressed

186    103089_at            X53526                   CD48 antigen

187    160663_at            BC011308              EST

188    160119_at            NM_007961           TEL oncogene

189    104547_at            J00388                    dihydrofolate reductase gene

190    162198_f_at         NM_009139           SCYA6 (C10, MRP-1)

191    98948_at              BE914613               EST

192    92472_f_at           NM_011408           schlafen 2

193    92232_at              NM_007707           cytokine inducible SH2-containing protein 3

194    101878_at            NM_007654           CD72 antigen

195    94294_at              NM_007630           cyclin B2

196    AFFX-TransRecMur/X57349_M_at NM_011638                                                                                                                                            transferrin receptor

197    102809_s_at         BC011474              lymphocyte protein tyrosine kinase

198    99973_s_at           NM_019664           potassium inwardly-rectifying channel, subfamily J, member 15

199    103205_at            NM_016921           T-cell, immune regulator 1

200    97421_at              NM_008017           fibroblast growth factor inducible 16

201    95148_at              NM_016895           adenylate kinase 2

202    95032_at              BC005475              DNA segment, Chr 7, ERATO Doi 348, expressed

203    95532_at              BG070246              EST

204    98035_g_at           NM_010387           histocompatibility 2, class II, locus Mb1

205    161103_at            BG064768              EST

206    103662_at            NM_008677           neutrophil cytosolic factor 4

207    104464_s_at         BC011472              EST

208    160298_at            AK011256              EST

209    162206_f_at         NM_007707           cytokine inducible SH2-containing protein 3

210    102310_at            NM_009137           SCYA22 (ABCD-1)

211    98433_at              BC002031              BH3 interacting domain death agonist

212    99974_at              NM_019664           potassium inwardly-rectifying channel, subfamily J, member 15

213    104099_at            NM_009402           peptidoglycan recognition protein

214    104147_at            NM_053179           sialic acid synthase

215    101506_at            NM_021336           U2 small nuclear ribonucleoprotein polypeptide A'

216    103203_f_at         W29450                  EST

217    93112_at              NM_008564           mini chromosome maintenance deficient 2

218    104097_at            U89795                   budding uninhibited by benzimidazoles 1 homolog

219    99669_at              NM_008495           lectin, galactose binding, soluble 1

220    99149_at              NM_025863           EST

221    102326_at            NM_010877           neutrophil cytosolic factor 2

222    102293_at            NM_009578           zinc finger protein, subfamily 1A, 1 (Ikaros)

223    92833_at              NM_010401           histidine ammonia lyase

224    92540_f_at           Z67748                   spermidine synthase gene

225    92633_at              NM_022325           cathepsin Z

226    94521_at              NM_009878           cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)

227    102748_at            NM_007976           coagulation factor V

228    98026_g_at           NM_010161           ecotropic viral integration site 2

229    104155_f_at         U19118                   activating transcription factor 3

230    104606_at            NM_013706           CD52 antigen

231    95423_at              NM_009787           calcium binding protein, intestinal

232    102914_s_at         U23778                   hematopoietic-specific early-response A1-b

233    100322_at            U68543                   immunoglobulin kappa chain

234    101561_at            K02236                   metallothionien II

235    94208_at              AK005989              EST

236    92978_s_at           NM_011111           serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2

237    98968_at              NM_010864           myosin Va

238    93869_s_at           U23781                   hematopoietic-specific early-response A1-d

239    100955_at            NM_026024           EST

240    94939_at              NM_007651           CD53 antigen

241    94831_at              M65270                  EST

242    98147_at              AC002397              EST

243    97468_at              NM_016904           CDC28 protein kinase 1

244    99333_at              M80778                  Opioid receptor, delta 1

245    97327_at              NM_007999           flap structure specific endonuclease 1

246    102851_s_at         NM_013545           hemopoietic cell phosphatase

247    95608_at              NM_007798           cathepsin B

248    98025_at              NM_010161           ecotropic viral integration site 2

249    99051_at              M36579                  M-caveolin

250    98822_at              NM_015783           interferon-stimulated protein (15 kDa)

251    103016_s_at         NM_009853           CD68 antigen

252    102156_f_at         M80423                  immunoglobulin kappa chain

253    104701_at            NM_011498           basic helix-loop-helix domain containing, class B2

254    100981_at            NM_008331           interferon-induced protein with tetratricopeptide repeats 1

255    98603_s_at           U20857                   RNA1 homolog (Fug1)

256    92913_at              NM_011994           ATP-binding cassette, sub-family D (ALD), member 2

257    102957_at            BC006948              lymphocyte cytosolic protein 2

258    101221_at            BG065737              EST

259    160314_at            NM_026438           EST

260    96963_s_at           L14553                   TAX responsive element binding protein 107

261    98572_at              NM_026400           DnaJ (Hsp40) homolog, subfamily B, member 11

262    95348_at              NM_008176           CXCL1 (GRO-1)

263    103562_f_at         M26005                  Mouse endogenous retrovirus truncated gag protein

264    96319_at              NM_023223           cell division cycle 20 homolog

265    96602_g_at           NM_023268           quiescin Q6

266    102353_at            NM_008404           integrin beta 2

267    94367_at              NM_030724           uridine-cytidine kinase 2

268    97894_at              AF109905              TLP21 (21-kDa TBP-like protein)

269    98996_at              L29479                   serine/threonine kinase 18

270    99632_at              NM_019499           MAD2 (mitotic arrest deficient, homolog)-like 1

271    104527_at            NM_011234           RAD51 homolog

272    95706_at              BI414633                lectin, galactose binding, soluble 3

273    160496_s_at         X62154                   mini chromosome maintenance deficient

274    97733_at              NM_007413           adenosine A2b receptor

275    98436_s_at           U54803                   adenylosuccinate synthetase

276    96357_at              NM_023142           actin related protein 2/3 complex, subunit 1B (41 kDa)

277    92567_at              NM_007737           procollagen, type V, alpha 2

278    93861_f_at           M17327                  Mouse endogenous murine leukemia virus modified polytropic provirus DNA

279    95803_at              D87968                   protein tyrosine phosphatase, non-receptor type substrate 1

280    93250_r_at           NM_008252           high mobility group box 2

281    100328_s_at         NM_011090           paired-Ig-like receptor A3

282    160246_at            BC009090              EST

283    103614_at            NM_019408           nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100

284    161984_f_at         AK019448              procollagen, type III, alpha 1

285    93167_f_at           AF303744              oxidized LDL receptor (Lox-1)

286    95159_at              AK010250              Mrps18b

287    97824_at              NM_026631           EST

288    103625_at            NM_054070           AFG3(ATPase family gene 3)-like 1

289    161345_f_at         NM_007825           cytochrome P450, 7b1

290    93495_at              NM_016764           peroxiredoxin 4

291    93860_i_at           M17327                  Mouse endogenous murine leukemia virus modified polytropic provirus DNA

 

* the order does not imply degree of gene expression

** systematic is the Affymetrix probe set unique identifier

*** description is based on Affymetrix classification