Table 4: Asthma Signature Genes-overlap between OVA and Asp*
Systematic** Genbank Description***
1 101616_at M19911 immunoglobulin kappa chain
2 93717_at NM_011331 SCYA12 (MCP-5)
3 101436_at NM_008599 SCYB9 (Mig)
4 101027_s_at NM_013917 pituitary tumor-transforming 1
5 101803_at AJ010792 Muc5AC-like gene
6 93755_at NM_023881 resistin like beta
7 94330_at AK002734 EST
8 99578_at NM_011623 topoisomerase (DNA) II alpha
9 103289_at NM_016869 low density lipoprotein receptor-related protein 4
10 103088_at NM_007697 close homolog of L1
11 102782_at BC006884 EST
12 162287_r_at NM_017474 chloride channel calcium activated 3
13 94761_at X70058 EST
14 93097_at NM_007482 arginase 1
15 101870_at V00793 immunogloblin heavy chain (IgG1)
16 92459_at NM_021443 SCYA8 (MCP-2)
17 161968_f_at D83648 CCR5
18 93099_f_at NM_011121 polo-like kinase homolog
19 92742_at U77462 SCYA11 (eotaxin-1)
20 102337_s_at M31312 beta Fc receptor type II
21 100127_at BC018397 cellular retinoic acid binding protein II
22 102736_at M19681 CCL2 (JE)
23 102204_at L36434 Kreisler
24 101075_f_at NM_011783 anterior gradient 2
25 160159_at NM_007629 cyclin B1, related sequence 1
26 101024_i_at AJ005559 SPRR2A
27 95338_s_at NM_008605 matrix metalloproteinase 12
28 103024_at NM_007403 a disintegrin and metalloprotease domain 8
29 101752_f_at BC003888 immunoglobulin heavy chain
30 96973_f_at X02468 immunoglobulin kappa chain
31 97563_f_at AF042798 VAV
32 94383_at NM_009364 tissue factor pathway inhibitor 2
33 96336_at NM_025961 glycine amidinotransferase
34 96081_at X60980 EST
35 101747_f_at BC010324 EST
36 102719_f_at D83648 CCR5
37 95339_r_at NM_008605 matrix metalloproteinase 12
38 101464_at NM_011593 tissue inhibitor of metalloproteinase
39 97574_f_at AF036736 Tyk2
40 99701_f_at AJ005560 pheromone receptor V2R1
41 99412_at U29677 CCR3
42 102718_at AF022990 CCR5
43 101320_f_at L28059 Ig B cell antigen receptor gene
44 101025_f_at AJ005559 SPRR2A
45 103507_at X93328 EGF-like module containing, mucin-like, hormone receptor-like sequence 1
46 104388_at NM_011338 SCYA9 (MRP-2)
47 101871_f_at BC003435 immunoglobulin heavy chain (IgG1)
48 102860_at BC002065 serine protease inhibitor 2-1
49 97575_f_at AF036737 immunoglobulin heavy chain
50 98372_at AF253409 aldehyde dehydrogenase family 1, subfamily A3
51 93302_at U78770 trefoil protein; spasmolytic polypeptide (mSP) gene
52 102155_f_at K03461 immunoglobulin kappa chain
53 103362_at NM_008965 prostaglandin E receptor 4 (subtype EP4)
54 104374_at NM_009252 serine protease inhibitor 2-2
55 103715_at NM_009132 scinderin
56 97008_f_at L33943 sperm motility kinase 2
57 92737_at U20949 lymphoid-specific interferon regulatory factor (LSIRF)
58 93858_at NM_021274 SCYB10 (IP-10)
59 100362_f_at X02463 immunoglobulin heavy chain
60 98765_f_at U23095 Mus musculus CAG trinucleotide repeat mRNA
61 97567_f_at AF045026 immunoglobulin kappa chain
62 96020_at NM_009777 complement component 1, q subcomponent, beta polypeptide
63 93871_at L32838 interleukin 1 receptor antagonist
64 99457_at X82786 antigen identified by monoclonal antibody Ki 67
65 92898_at NM_007825 cytochrome P450, 7b1
66 99413_at NM_009912 CCR1
67 93441_at BC002320 EST
68 161898_i_at NM_013604 metaxin
69 99384_at M13945 2'-5¢ oligoadenylate synthetase
70 100299_f_at U68543 immunoglobulin kappa chain
71 100360_f_at X02466 immunoglobulin heavy chain
72 103821_at NM_011799 cell division cycle 6 homolog
73 104712_at L00039 c-myc
74 94792_at AV230061 EST
75 97577_f_at AF042086 immunoglobulin heavy chain
76 95749_at AK014338 arginine-rich, mutated in early stage tumors
77 100376_f_at AF025445 immunoglobulin heavy chain
78 99564_at NM_010931 nuclear protein 95
79 96972_f_at X00651 immunoglobulin kappa chain
80 97826_at BF578028 EST
81 101920_at AF036898 DNA polymerase epsilon, subunit 2
82 102076_at AJ235940 immunoglobulin kappa gene
83 92694_at NM_009892 chitinase 3-like 3
84 98500_at D13695 interleukin 1 receptor-like 1
85 160509_at NM_023186 chitinase, acidic
86 101716_at AF017260 ribonuclease 5 precursor
87 94425_at NM_010745 lymphocyte antigen 86
88 100721_f_at NM_019633 immunoglobulin heavy chain
89 161000_i_at BC009096 EST
90 97576_f_at AF036738 immunoglobulin heavy chain
91 103492_at NM_019696 metallocarboxypeptidase CPX-1
92 92471_i_at NM_011408 schlafen 2
93 102157_f_at M15520 immunoglobulin kappa chain
94 104423_at AK012919 EST
95 97566_f_at AF045024 cell cycle regulatory transcription factor DP1
96 99850_at X01857 EST
97 99799_at NM_011691 vav oncogene
98 103977_at NM_007972 coagulation factor X
99 100682_f_at BC018315 immunoglobulin heavy chain (IgM)
100 102712_at X03505 serum amyloid A (SAA) 3
101 95546_g_at NM_010512 insulin-like growth factor 1
102 102334_at NM_010071 downstream of tyrosine kinase 2
103 161476_at NM_011179 prosaposin
104 94747_at NM_007780 colony stimulating factor 2 receptor, beta 1, low-affinity (granulocyte-macrophage)
105 160973_at AV113368 EST
106 94774_at NM_008327 interferon activated gene 202A
107 97519_at NM_009263 secreted phosphoprotein 1
108 92406_at D31956 CD7 antigen
109 97527_at NM_025415 EST
110 104509_at NM_009890 cholesterol 25-hydroxylase
111 92736_at NM_007514 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
112 94357_at NM_019810 solute carrier family 5, member 1
113 103563_at AK015966 EST
114 100325_at NM_008147 glycoprotein 49 A
115 101718_f_at U68543 immunoglobulin kappa chain
116 92223_at NM_007574 complement component 1, q subcomponent, c polypeptide
117 92877_at NM_009369 transforming growth factor, beta induced, 68 kDa
118 162362_f_at NM_011607 tenascin C
119 92217_s_at U05265 BALB/c gp49B
120 104174_at NM_008813 ectonucleotide pyrophosphatase/phosphodiesterase 1
121 99057_at M12379 EST
122 161173_f_at AV229143 EST
123 103226_at NM_008625 mannose receptor, C type 1
124 95753_at BG175174 EST
125 97763_at L11455 neutrophil cytosolic factor 1
126 99541_at AJ223293 kinesin-like 1
127 96971_f_at X00652 immunoglobulin heavy chain
128 104308_at NM_021334 integrin alpha X
129 92639_at BC014711 serine/threonine kinase 6
130 102585_f_at AB017349 immunoglobulin light chain
131 96964_at L14554 immunoglobulin light chain
132 102354_at BC004617 EST
133 101640_f_at U68543 immunoglobulin kappa chain
134 101331_f_at U68543 immunoglobulin kappa chain
135 92762_at NM_011999 C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 6
136 99979_at NM_009994 cytochrome P450, 1b1, benz[a]anthracene inducible
137 102755_at NM_010584 intelectin
138 99876_at AJ131777 src-like adaptor protein
139 100771_at Y17159 lymphocyte antigen 57
140 102025_at NM_018866 SCYB13 (BLC/BCA-1)
141 101521_at BC004702 baculoviral IAP repeat-containing 5
142 98562_at NM_007572 complement component 1, q subcomponent, alpha polypeptide
143 100116_at NM_026515 EST
144 103210_at NM_007781 colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
145 97444_at NM_023065 interferon gamma inducible protein 30
146 103040_at NM_009856 CD83 antigen
147 92832_at NM_009896 cytokine inducible SH2-containing protein 1
148 101468_at X12905 properdin factor, complement
149 101656_f_at U68543 immunoglobulin kappa chain
150 160406_at AJ006033 ctsk
151 161511_f_at AK019325 EST
152 100479_at NM_007872 DNA methyltransferase 3A
153 96784_at BE573736 EST
154 98473_at NM_009705 arginase type II
155 103690_at AW125574 EST
156 97411_at NM_007900 ect2 oncogene
157 102990_at AK019448 procollagen, type III, alpha 1
158 101913_at NM_010423 hairy/enhancer-of-split related with YRPW motif 1
159 96511_s_at NM_011691 vav oncogene
160 96515_at U70430 estrogen receptor beta
161 99509_s_at NM_010589 Janus kinase 3
162 102658_at NM_010555 interleukin 1 receptor, type II
163 99405_at Z95479 immunoglobulin kappa chain
164 102001_at NM_009104 ribonucleotide reductase M2
165 100772_g_at Y17159 lymphocyte antigen 57
166 100156_at NM_008566 mini chromosome maintenance deficient 5
167 102884_at NM_010566 inositol polyphosphate-5-phosphatase, 145 kDa
168 98772_at NM_009141 SCYB5 (LIX)
169 98859_at M99054 glucose dependent insulinotropic polypeptide
170 93465_at AK020278 EST
171 102697_at NM_019640 phosphotidylinositol transfer protein, beta
172 104548_at NM_009434 tumor-suppressing subchromosomal transferable fragment 3
173 160446_at U46068 von Ebner minor salivary gland protein mRNA
174 92918_at U66079 coagulation factor VII
175 99926_at AB001489 EST
176 98034_at NM_010387 histocompatibility 2, class II, locus Mb1
177 103441_at NM_007788 casein kinase II, alpha 1 related sequence 4
178 101868_i_at NM_010388 histocompatibility 2, class II, locus Mb2
179 104065_at AB042828 EDEM, similar to alpha-mannosidase
180 103418_at BC003335 EST
181 103201_at NM_009445 Ttk protein kinase
182 102892_at U31908 potassium voltage-gated channel, shaker-related subfamily, beta member 2
183 101020_at NM_009982 cathepsin C
184 102372_at BC006026 immunoglobulin joining chain
185 96295_at BC004827 DNA segment, Chr 8, ERATO Doi 814, expressed
186 103089_at X53526 CD48 antigen
187 160663_at BC011308 EST
188 160119_at NM_007961 TEL oncogene
189 104547_at J00388 dihydrofolate reductase gene
190 162198_f_at NM_009139 SCYA6 (C10, MRP-1)
191 98948_at BE914613 EST
192 92472_f_at NM_011408 schlafen 2
193 92232_at NM_007707 cytokine inducible SH2-containing protein 3
194 101878_at NM_007654 CD72 antigen
195 94294_at NM_007630 cyclin B2
196 AFFX-TransRecMur/X57349_M_at NM_011638 transferrin receptor
197 102809_s_at BC011474 lymphocyte protein tyrosine kinase
198 99973_s_at NM_019664 potassium inwardly-rectifying channel, subfamily J, member 15
199 103205_at NM_016921 T-cell, immune regulator 1
200 97421_at NM_008017 fibroblast growth factor inducible 16
201 95148_at NM_016895 adenylate kinase 2
202 95032_at BC005475 DNA segment, Chr 7, ERATO Doi 348, expressed
203 95532_at BG070246 EST
204 98035_g_at NM_010387 histocompatibility 2, class II, locus Mb1
205 161103_at BG064768 EST
206 103662_at NM_008677 neutrophil cytosolic factor 4
207 104464_s_at BC011472 EST
208 160298_at AK011256 EST
209 162206_f_at NM_007707 cytokine inducible SH2-containing protein 3
210 102310_at NM_009137 SCYA22 (ABCD-1)
211 98433_at BC002031 BH3 interacting domain death agonist
212 99974_at NM_019664 potassium inwardly-rectifying channel, subfamily J, member 15
213 104099_at NM_009402 peptidoglycan recognition protein
214 104147_at NM_053179 sialic acid synthase
215 101506_at NM_021336 U2 small nuclear ribonucleoprotein polypeptide A'
216 103203_f_at W29450 EST
217 93112_at NM_008564 mini chromosome maintenance deficient 2
218 104097_at U89795 budding uninhibited by benzimidazoles 1 homolog
219 99669_at NM_008495 lectin, galactose binding, soluble 1
220 99149_at NM_025863 EST
221 102326_at NM_010877 neutrophil cytosolic factor 2
222 102293_at NM_009578 zinc finger protein, subfamily 1A, 1 (Ikaros)
223 92833_at NM_010401 histidine ammonia lyase
224 92540_f_at Z67748 spermidine synthase gene
225 92633_at NM_022325 cathepsin Z
226 94521_at NM_009878 cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
227 102748_at NM_007976 coagulation factor V
228 98026_g_at NM_010161 ecotropic viral integration site 2
229 104155_f_at U19118 activating transcription factor 3
230 104606_at NM_013706 CD52 antigen
231 95423_at NM_009787 calcium binding protein, intestinal
232 102914_s_at U23778 hematopoietic-specific early-response A1-b
233 100322_at U68543 immunoglobulin kappa chain
234 101561_at K02236 metallothionien II
235 94208_at AK005989 EST
236 92978_s_at NM_011111 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2
237 98968_at NM_010864 myosin Va
238 93869_s_at U23781 hematopoietic-specific early-response A1-d
239 100955_at NM_026024 EST
240 94939_at NM_007651 CD53 antigen
241 94831_at M65270 EST
242 98147_at AC002397 EST
243 97468_at NM_016904 CDC28 protein kinase 1
244 99333_at M80778 Opioid receptor, delta 1
245 97327_at NM_007999 flap structure specific endonuclease 1
246 102851_s_at NM_013545 hemopoietic cell phosphatase
247 95608_at NM_007798 cathepsin B
248 98025_at NM_010161 ecotropic viral integration site 2
249 99051_at M36579 M-caveolin
250 98822_at NM_015783 interferon-stimulated protein (15 kDa)
251 103016_s_at NM_009853 CD68 antigen
252 102156_f_at M80423 immunoglobulin kappa chain
253 104701_at NM_011498 basic helix-loop-helix domain containing, class B2
254 100981_at NM_008331 interferon-induced protein with tetratricopeptide repeats 1
255 98603_s_at U20857 RNA1 homolog (Fug1)
256 92913_at NM_011994 ATP-binding cassette, sub-family D (ALD), member 2
257 102957_at BC006948 lymphocyte cytosolic protein 2
258 101221_at BG065737 EST
259 160314_at NM_026438 EST
260 96963_s_at L14553 TAX responsive element binding protein 107
261 98572_at NM_026400 DnaJ (Hsp40) homolog, subfamily B, member 11
262 95348_at NM_008176 CXCL1 (GRO-1)
263 103562_f_at M26005 Mouse endogenous retrovirus truncated gag protein
264 96319_at NM_023223 cell division cycle 20 homolog
265 96602_g_at NM_023268 quiescin Q6
266 102353_at NM_008404 integrin beta 2
267 94367_at NM_030724 uridine-cytidine kinase 2
268 97894_at AF109905 TLP21 (21-kDa TBP-like protein)
269 98996_at L29479 serine/threonine kinase 18
270 99632_at NM_019499 MAD2 (mitotic arrest deficient, homolog)-like 1
271 104527_at NM_011234 RAD51 homolog
272 95706_at BI414633 lectin, galactose binding, soluble 3
273 160496_s_at X62154 mini chromosome maintenance deficient
274 97733_at NM_007413 adenosine A2b receptor
275 98436_s_at U54803 adenylosuccinate synthetase
276 96357_at NM_023142 actin related protein 2/3 complex, subunit 1B (41 kDa)
277 92567_at NM_007737 procollagen, type V, alpha 2
278 93861_f_at M17327 Mouse endogenous murine leukemia virus modified polytropic provirus DNA
279 95803_at D87968 protein tyrosine phosphatase, non-receptor type substrate 1
280 93250_r_at NM_008252 high mobility group box 2
281 100328_s_at NM_011090 paired-Ig-like receptor A3
282 160246_at BC009090 EST
283 103614_at NM_019408 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
284 161984_f_at AK019448 procollagen, type III, alpha 1
285 93167_f_at AF303744 oxidized LDL receptor (Lox-1)
286 95159_at AK010250 Mrps18b
287 97824_at NM_026631 EST
288 103625_at NM_054070 AFG3(ATPase family gene 3)-like 1
289 161345_f_at NM_007825 cytochrome P450, 7b1
290 93495_at NM_016764 peroxiredoxin 4
291 93860_i_at M17327 Mouse endogenous murine leukemia virus modified polytropic provirus DNA
* the order does not imply degree of gene expression
** systematic is the Affymetrix probe set unique identifier
*** description is based on Affymetrix classification